PeakTrace
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Application data |
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| Created by | Daniel Tillett |
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| Biological application domain(s) | Sequencing |
| Principal bioinformatics method(s) | Base-calling |
| Technology | Sanger |
| Created at | Nucleics |
| Maintained? | Yes |
| Input format(s) | .ab1, .abi, .abd |
| Output format(s) | .ab1, .scf, .seq, .phd.1 |
| Software features | DNA basecaller |
| Programming language(s) | C |
| Licence | Commercial |
| Operating system(s) | Windows, Mac OS X, Linux 64 |
| Contact: | support@nucleics.com |
Summary: PeakTrace is an alternative basecaller for improving the quality and read length of Sanger DNA sequencing traces. The PeakTrace basecaller works with trace files produced by the ABI 310, 3700, 3100, 3130, 3730, and 3500 DNA sequencers. MegBACE sequencers are also supported.
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Description
PeakTrace is a basecaller for improving the quality and read length of Sanger DNA sequencing traces. The PeakTrace basecaller works with trace files produced by the ABI 310, 3700, 3100, 3130, 3730, and 3500 DNA sequencers. The MegBACE sequencers are also supported.
PeakTrace can improve the number of high quality bases by up to 50% as compared to that obtained from the ABI KB basecaller. PeakTrace offers traces that are better resolved with fewer errors than any other available basecaller.
PeakTrace is available in three formats. PeakTrace:Box™ is a standalone hardware system designed for large to medium facilities. Auto PeakTrace RP™ is a user installable version of PeakTrace for small to medium scale users. PeakTrace FTP™ is a online based service for small scale users.
Links
- PeakTrace Homepage [ edit link ]
- PeakTrace White Paper [ edit link ]
- PeakTrace White Paper [ edit link ]
- PeakTrace White Paper [ edit link ]
References
none specified
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