SOAPsnp
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Application data |
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| Biological application domain(s) | SNP detection |
|---|---|
| Created at | Beijing Genomics Institute |
| Maintained? | Yes |
| Input format(s) | SOAP |
| Output format(s) | GLFv2, GPFv2 |
| Programming language(s) | C, C++ |
Summary: SOAPsnp is an accurate consensus sequence builder based on soap1 and SOAPaligner/soap2's alignment output. It calculates a quality score for each consensus base, which can be used for any latter process to call SNPs.
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Link: http://soap.genomics.org.cn/soapsnp.html Category: SNP/Indel Discovery
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