SeqWords

Application data
Created by	Gatherer D, Schattner P, Shivak D, Stajich J
Principal bioinformatics method(s)	k-mer counting
Created at	The BioPerl Foundation
Maintained?	Maybe
Input format(s)	FASTA
Software features	Part of BioPerl
Programming language(s)	Perl
Licence	Perl artistic licence

Summary: SeqWords is a featherweight object for the calculation of n-mer word occurrences in a single sequence.

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Bio::Tools::SeqWords is a featherweight object for the calculation of n-mer word occurrences in a single sequence. It is envisaged that the object will be useful for construction of scripts which use n-mer word tables as the raw material for statistical calculations; for instance, hexamer frequency for the calculation of coding potential, or the calculation of periodicity in repetitive DNA.

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