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Text replace - "ChIP-Seq" to "ChIP-seq"
{{Bioinformatics application
|sw summary=A proprietary NGS analysis solution. Powerful hardware comes with preinstalled software, organized in workflows.
|bio domain=Sequence assembly, Sequence assembly (de novo assembly), ChIP-Seqseq, RNA-Seq
|bio method=Sequence assembly, Plotting and rendering, Sequence error correction, Mutation detection, Peak calling, Gene expression profiling, Sequence alignment
|bio tech=Any
Most de novo sequencing projects combine the use of two or more different sequencing platforms (eg. long reads for a confident backbone and short reads for a high coverage). The aim of the hybrid de novo assembly workflow is to build up a genome or its parts by combining short/long and color coded/nucleotide coded reads. Unlike hybrid reference assembly, the read files produced by different sequencing technologies are assembled together as a joint set of mixed reads. Short reads can be single end, mate paired or paired end.
===ChIP-Seqseq===ChIP-Seq seq is used to analyze the protein interactions with the DNA. It combines chromatin immunoprecipitation (ChIP) with massively parallel DNA sequencing to identify the loci on the DNA that are associated with the protein of interest. The workflow can be used to determine the protein binding/histone modification sites from the distribution of NGS reads along the reference sequence with the help of complex algorithms that use specialized mathematical methods to identify significant read densities.
===BLAST===
