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Partek Genomics Suite

630 bytes removed, 15:22, 31 August 2010
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|sw summary=Easy to use software providing A to Z analysis for all Next Generation Sequencing and Microarray data.
|sw logo=PartekLogo.jpg
|bio domain=GenomicsAllele-specific transcription, TranscriptomicsRNA-Seq Quantitation, Epigenomics, Functional Genomics, RNA-Seq, ChIP-Seq, DNA-Seq, Methyl-Seq, DGE, SAGE, microarray, qPCR, Transcript Quantitation, Alternative Splicing, SNP discovery, small Small RNA transcriptome|bio method=For next generation sequencing data: Bowtie alignment, transcript isoform quantitation, new transcript identification, alternative splicing, allele specific expression, protein binding peak detection, motif discovery/analysis, SNP detection Functional genomics approaches:integrated RNA-Seq + microarray analysis, integrated ChIP-Seq+RNA-Seq analysis, integrated expression-copy number analysis, integrated transcript + sRNA analysis Biological analysis:analysis on statistical results in biological network context with Gene Ontology and pathway analysis
|bio tech=Supporting all microarray and next generation sequencing technologies including...
Affymetrix • Agilent • Applied Biosystems • Illumina • Ion Torrent • NimbleGen • Roche/454 Life Sciences • Custom Arrays
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