6
edits
Changes
no edit summary
{{Bioinformatics application
|sw summary=Performs ratio, GC content correction and A normalization of data obtained using low coverage (one read every 100-10,000 bp) high throughput sequencing. It performs a "discrete" normalization looking method for the ploidy of the genome. It will also provide tumour content if at least two ploidy states can be foundCopy Number Aberration in cancer samples.|bio domain=Cancer biology, Copy number estimation, Genomics, |bio method=Copy number estimation, mixture model, Peak detection, Normalization,
|bio tech=Illumina
|created by=Stefano Berri and Arief Gusnanto
|created at=University of Leeds
|maintained=Yes
|input format=Delimited Text, SAM/BAM, |output format=Delimited Text, |language=R, Perl, |library=SAMtools, |licence=GPLv2, |os=Linux, Mac OS X, Windows,
}}
== Description ==
