Strelka

Application data
Created by	Christopher T. Saunders1, Wendy S. W. Wong, Sajani Swamy, Jennifer Becq, Lisa J. Murray, R. Keira Cheetham
Biological application domain(s)	Genetic variation
Principal bioinformatics method(s)	Variant calling
Created at	Illumina
Maintained?	Yes
Input format(s)	BAM
Output format(s)	VCF
Software features	Multicore
Programming language(s)	Perl
Operating system(s)	Linux

Summary: Strelka is an analysis package designed to detect somatic SNVs and small indels from the aligned sequencing reads of matched tumor-normal samples.

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Links

• Strelka Homepage [ edit link ]
• Strelka Homepage [ edit link ]

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References

1. . 2012. Bioinformatics

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