Difference between revisions of "RMAP"

From SEQwiki
Jump to: navigation, search
m (Text replace - "([= ])[Mm]apping," to "$1Read mapping,")
 
(3 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
{{Bioinformatics application
 
{{Bioinformatics application
 
|sw summary=Assembles 20 - 64 bp Solexa reads to a FASTA reference genome. By Andrew D. Smith and Zhenyu Xuan at CSHL. (published in BMC Bioinformatics). POSIX OS required.
 
|sw summary=Assembles 20 - 64 bp Solexa reads to a FASTA reference genome. By Andrew D. Smith and Zhenyu Xuan at CSHL. (published in BMC Bioinformatics). POSIX OS required.
|bio method=Mapping, Bisulfite mapping
+
|bio domain=DNA methylation,
|licence=GPLv3,  
+
|bio method=Read mapping, Bisulfite mapping
|os=Linux, OSX,  
+
|licence=GPLv3,
 +
|os=Linux, Mac OS X,
 
}}
 
}}
Link: http://rulai.cshl.edu/rmap/ Category: Assembly
+
Category: Assembly
 +
{{Links}}
 +
{{References}}

Latest revision as of 18:45, 5 November 2015

Application data

Biological application domain(s) DNA methylation
Principal bioinformatics method(s) Read mapping, Bisulfite mapping
Maintained? Maybe
Licence GPLv3
Operating system(s) Linux, Mac OS X

Summary: Assembles 20 - 64 bp Solexa reads to a FASTA reference genome. By Andrew D. Smith and Zhenyu Xuan at CSHL. (published in BMC Bioinformatics). POSIX OS required.

"Error: no local variable "counter" was set." is not a number.

Category: Assembly

Links


References

  1. . 2008. BMC Bioinformatics
  2. . 2009. Bioinformatics


To add a reference for RMAP, enter the PubMed ID in the field below and click 'Add'.