Difference between revisions of "TEQC"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=Quality assessment of target enrichment experiments. Quality measures comprise specificity and sensitivity of the capture, enrichment, per-target read coverage and its relation to hybridization probe characteristics, coverage uniformity and reproducibility, and read duplicate analysis. Several diagnostic plots allow visual inspection of the data quality. | |sw summary=Quality assessment of target enrichment experiments. Quality measures comprise specificity and sensitivity of the capture, enrichment, per-target read coverage and its relation to hybridization probe characteristics, coverage uniformity and reproducibility, and read duplicate analysis. Several diagnostic plots allow visual inspection of the data quality. | ||
| − | |bio domain=Targeted resequencing, | + | |bio domain=Targeted resequencing, |
| − | |bio method=Sequencing Quality Control, | + | |bio method=Sequencing Quality Control, |
| + | |language=R | ||
}} | }} | ||
== Description == | == Description == | ||
Revision as of 05:25, 20 May 2011
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Application data |
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| Biological application domain(s) | Targeted resequencing |
|---|---|
| Principal bioinformatics method(s) | Sequencing Quality Control |
| Maintained? | Maybe |
| Programming language(s) | R |
Summary: Quality assessment of target enrichment experiments. Quality measures comprise specificity and sensitivity of the capture, enrichment, per-target read coverage and its relation to hybridization probe characteristics, coverage uniformity and reproducibility, and read duplicate analysis. Several diagnostic plots allow visual inspection of the data quality.
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Description
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