Difference between revisions of "MAQ"
| Line 5: | Line 5: | ||
|created by=Heng Li | |created by=Heng Li | ||
|created at=The Wellcome Trust Sanger Institute | |created at=The Wellcome Trust Sanger Institute | ||
| + | |maintained=No | ||
|input format=FASTA, FASTQ, | |input format=FASTA, FASTQ, | ||
|output format=Maq | |output format=Maq | ||
Revision as of 11:46, 11 August 2011
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Application data |
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| Created by | Heng Li |
|---|---|
| Biological application domain(s) | Genomics, SNP discovery |
| Principal bioinformatics method(s) | Mapping |
| Created at | The Wellcome Trust Sanger Institute |
| Maintained? | No |
| Input format(s) | FASTA, FASTQ |
| Output format(s) | Maq |
| Programming language(s) | C++, Perl |
| Licence | GPL |
Summary: Mapping and Assembly with Qualities (renamed from MAPASS2). Particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has preliminary functions to handle ABI SOLiD data. Written by Heng Li from the Sanger Centre.
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Link: http://sourceforge.net/projects/maq/ Category: Alignment & Mapping
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