Difference between revisions of "Variant Effect Predictor"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=Tool for predicting effects of variants for any genome in Ensembl. The web version is limited to 750 variants, but an API and Perl script are provided as well. | |sw summary=Tool for predicting effects of variants for any genome in Ensembl. The web version is limited to 750 variants, but an API and Perl script are provided as well. | ||
| − | |bio domain=SNP Annotation, | + | |bio domain=SNP Annotation, |
|created at=EBI | |created at=EBI | ||
|maintained=Yes | |maintained=Yes | ||
| + | |email address=helpdesk@ensembl.org | ||
|input format=VCF | |input format=VCF | ||
|language=Perl | |language=Perl | ||
Revision as of 19:41, 3 December 2015
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Application data |
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| Biological application domain(s) | SNP Annotation |
|---|---|
| Created at | EBI |
| Maintained? | Yes |
| Input format(s) | VCF |
| Programming language(s) | Perl |
| Contact: | helpdesk@ensembl.org |
Summary: Tool for predicting effects of variants for any genome in Ensembl. The web version is limited to 750 variants, but an API and Perl script are provided as well.
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Description
Each Ensembl genome has its own copy of Variant Effect Predictor. The web interface will enable analyzing 750 mutations at a time; larger sets require using the API.
Links
- Variant Effect Predictor Analysis server [ edit link ]
- Variant Effect Predictor Source code [ edit link ]
References
none specified
To add a reference for Variant Effect Predictor, enter the PubMed ID in the field below and click 'Add'.
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