Difference between revisions of "SPP"
m (adapting to EDAM terms) |
m (Text replace - "ChIP-Seq" to "ChIP-seq") |
||
| Line 1: | Line 1: | ||
{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=R-scripts for ChIP-seq analysis. | |sw summary=R-scripts for ChIP-seq analysis. | ||
| − | |bio domain=Genomics, ChIP- | + | |bio domain=Genomics, ChIP-seq, |
|bio method=Peak calling, | |bio method=Peak calling, | ||
|bio tech=Illumina,454,Sanger,SOLiD,Ion Torrent | |bio tech=Illumina,454,Sanger,SOLiD,Ion Torrent | ||
Latest revision as of 10:34, 11 January 2016
|
Application data |
|
| Created by | Kharchenko P |
|---|---|
| Biological application domain(s) | Genomics, ChIP-seq |
| Principal bioinformatics method(s) | Peak calling |
| Technology | Illumina, 454, Sanger, SOLiD, Ion Torrent |
| Created at | Harvard, Peter Park's lab |
| Maintained? | Maybe |
| Input format(s) | ELAND, MAQ, Bowtie, Arachne binary |
| Software features | multi-threading |
| Programming language(s) | R |
Summary: R-scripts for ChIP-seq analysis.
"Error: no local variable "counter" was set." is not a number.
Useful on multi-core and multi-node platforms.
Links
References
none specified
To add a reference for SPP, enter the PubMed ID in the field below and click 'Add'.
[ edit box ]
Search for "SPP" in the SEQanswers forum / BioStar or:
| Web Search | Wiki Sites | Scientific |
|---|---|---|
