Difference between revisions of "Spiral Genetics"
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|bio domain=Alignment, Comparative Genomics, DNA-Seq, Exome and Whole genome variant detection, Genomic Assembly, Integrated solution, Mapping, Quality Control, Read alignment, Reference assembly, Resequencing, SNP Annotation, SNP discovery, Sequence analysis, Sequencing, Targeted assembly, Targeted resequencing, Whole Genome Resequencing, | |bio domain=Alignment, Comparative Genomics, DNA-Seq, Exome and Whole genome variant detection, Genomic Assembly, Integrated solution, Mapping, Quality Control, Read alignment, Reference assembly, Resequencing, SNP Annotation, SNP discovery, Sequence analysis, Sequencing, Targeted assembly, Targeted resequencing, Whole Genome Resequencing, | ||
|bio method=Alignment, Annotation, Assembly, Burrows-Wheeler, Data compression, Genome Alignment, Hadoop, MapReduce, Mapping, Trimming, SNP discovery, | |bio method=Alignment, Annotation, Assembly, Burrows-Wheeler, Data compression, Genome Alignment, Hadoop, MapReduce, Mapping, Trimming, SNP discovery, | ||
| − | |bio tech= | + | |bio tech=any, |
|created by=Spiral Genetics | |created by=Spiral Genetics | ||
|created at=http://www.spiralgenetics.com | |created at=http://www.spiralgenetics.com | ||
Revision as of 09:19, 15 September 2011
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Application data |
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| Created by | Spiral Genetics |
|---|---|
| Biological application domain(s) | Alignment, Comparative Genomics, DNA-Seq, Exome and Whole genome variant detection, Genomic Assembly, Integrated solution, Mapping, Quality Control, Read alignment, Reference assembly, Resequencing, SNP Annotation, SNP discovery, Sequence analysis, Sequencing, Targeted assembly, Targeted resequencing, Whole Genome Resequencing |
| Principal bioinformatics method(s) | Alignment, Annotation, Assembly, Burrows-Wheeler, Data compression, Genome Alignment, Hadoop, MapReduce, Mapping, Trimming, SNP discovery |
| Technology | any |
| Created at | http://www.spiralgenetics.com |
| Maintained? | Yes |
| Input format(s) | FASTA, FASTQ, Fasta.gz, Fastq.gz |
| Output format(s) | Tab-delimited file |
| Software features | Accurate, Fast, Gapped alignment, Ungapped alignment, Cloud Computing, Hadoop, Mapping, SNP annotation, SNP calling, command line, filter-based annotation |
| Programming language(s) | C++ |
| Licence | Available as a standalone system |
| Operating system(s) | Linux, Mac OS X, Windows |
Summary: Spiral Genetics provides alignment to reference, variant detection, variant filtering and annotation for any sized next generation sequencing dataset. Using cloud computing, the Spiral Platform can produce results at ultra high speeds through a web browser interface.
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Spiral is a revolutionary sequence analysis software platform that puts the power of cloud computing at your fingertips.]
Rapid improvements in next generation sequencing technology and decreases in cost have created an exponential amount of sequence data to be analyzed. With the massive influx of data, you need analysis software that is fast, user-friendly, and cost-effective. Spiral unlocks whole genome, exome, and targeted sequencing, with a solution that offers speed, simplicity, and savings.
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