Sequencher
Application data |
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Created by | Genecodes |
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Biological application domain(s) | Sequence assembly (de novo assembly), SNP detection |
Principal bioinformatics method(s) | Sequence assembly, Sequence alignment |
Technology | 454, Illumina, ABI SOLiD, Ion Torrent, Sanger |
Maintained? | Yes |
Input format(s) | FASTQ, FASTA |
Output format(s) | proprietary |
Software features | Bisulfite sequencing, consensus sequence generation and export, SNP/InDel/Read Error display and search |
Licence | Commercial |
Operating system(s) | Windows, Mac OS X |
Summary: Desktop alignment software now with plugins to MAQ and GSNAP for NGS sequence date
"Error: no local variable "counter" was set." is not a number.
Description
Sequencher 5.0 has been updated to deal with NGS data. It now uses Tablet, MAQ, and GSNAP as plugins to deal with NGS data. Requires cygwin libraries on Windows in order to run plugins.
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