CopySeq

Application data
Biological application domain(s)	Structural variants, Copy number estimation, Genotyping, Personal genomics
Technology	Illumina/Solexa
Created at	Weizmann Institute of Science, EMBL
Maintained?	Yes
Input format(s)	BAM
Output format(s)	Tab-delimited file
Programming language(s)	Java 1.6, R
Operating system(s)	Mac OS X 10.5, Linux

Summary: CopySeq analyzes the depth-of-coverage of whole genome resequencing data to predict CNVs and to infer quantitative locus copy-number genotypes.

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Links

• CopySeq Homepage [ edit link ]
• CopySeq Mailing list [ edit link ]

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References

1. . 2010. PLoS Computational Biology

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