CopySeq

Application data
Biological application domain(s)	Structural variation, Copy number estimation, Genotyping, Personalised medicine
Technology	Illumina
Created at	Weizmann Institute of Science, EMBL
Maintained?	Yes
Input format(s)	BAM
Output format(s)	Tab-delimited file
Programming language(s)	Java, R
Operating system(s)	Mac OS X, Linux

Summary: CopySeq analyzes the depth-of-coverage of whole genome resequencing data to predict CNVs and to infer quantitative locus copy-number genotypes.

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Links

• CopySeq Homepage [ edit link ]
• CopySeq Mailing list [ edit link ]

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References

1. . 2010. PLoS Computational Biology

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