BBSeq
|
Application data |
|
| Biological application domain(s) | RNA-Seq quantification |
|---|---|
| Maintained? | Maybe |
| Programming language(s) | R |
Summary: Tool for analyzing RNA-Seq data to analyze gene expression
"Error: no local variable "counter" was set." is not a number.
Description
BBSeq incorporates two approaches: (i) a simple beta-binomial generalized linear model, which has not been extensively tested for RNA-Seq data, and (ii) an extension of an expression mean-variance modeling approach to RNA-Seq data, involving modeling of the overdispersion as a function of the mean. The approaches are flexible, allowing for general handling of discrete experimental factors and continuous covariates.
Links
References
To add a reference for BBSeq, enter the PubMed ID in the field below and click 'Add'.
[ edit box ]
Search for "BBSeq" in the SEQanswers forum / BioStar or:
| Web Search | Wiki Sites | Scientific |
|---|---|---|
