CisGenome

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Application data

Biological application domain(s) ChIP-seq, ChIP-on-chip, Sequence motifs
Principal bioinformatics method(s) Gibbs sampling, Integrated solution, Sequence motif recognition, Data retrieval
Created at Johns Hopkins and Stanford
Maintained? Yes
Programming language(s) C, C++
Operating system(s) UNIX, Windows

Summary: An integrated tool for tiling array, ChIP-seq, genome and cis-regulatory element analysis

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Link: http://www.biostat.jhsph.edu/~hji/cisgenome/

Links

none specified


References

  1. . 2008. Nature Biotechnology


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