EDENA

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Application data

Principal bioinformatics method(s) Sequence assembly
Created at Geneva University Hospitals, University of Geneva
Maintained? Maybe
Input format(s) FASTA, FASTQ

Summary: An assembler dedicated to process the millions of very short reads produced by the Illumina Genome Analyzer.

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Edena is based on the traditional overlap layout paradigm. All exact overlaps between any pair of reads are computed and structured in a graph (overlap step).

Links


References

  1. . 2008. Genome Research


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