FindPeaks 3.1
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Application data |
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| Created by | Anthony Fejes |
|---|---|
| Biological application domain(s) | ChIP-seq |
| Principal bioinformatics method(s) | Peak calling |
| Technology | Illumina |
| Created at | BC Genome Sciences Centre |
| Maintained? | Yes |
| Input format(s) | ELAND, MAQ, BED |
| Output format(s) | WIG, Peaks |
| Licence | GPLv3 |
Summary: Findpeaks was developed to perform analysis of ChIP-seq experiments.
"Error: no local variable "counter" was set." is not a number.
It uses a naive algorithm for identifying regions of high coverage, which represent Chromatin Immunoprecipitation enrichment of sequence fragments, indicating the location of a bound protein of interest.
Please note that FindPeaks is currently maintained as part of the FindPeaks_4.0_(Vancouver_Short_Read_Package) Vancouver Short Read Analysis package.
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