MapNext
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Application data |
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| Biological application domain(s) | SNP detection, RNA-Seq alignment |
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| Principal bioinformatics method(s) | Sequence alignment |
| Maintained? | Maybe |
| Input format(s) | FASTA, FASTQ |
| Programming language(s) | C++, Perl |
Summary: MapNext provides four mainly analysis: (i) unspliced alignment and clustering of reads, (ii) spliced alignment of transcriptomic reads, (iii) SNP detection and calculation of SNP frequency from population sequences, and (iv) storage of result data into database to make it available for more flexible query and further analyses.
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