PeakRanger
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Application data |
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| Created by | Xin Feng |
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| Biological application domain(s) | ChIP-seq |
| Principal bioinformatics method(s) | Peak calling |
| Maintained? | Yes |
| Input format(s) | SAM/BAM, Bowtie, BED |
| Output format(s) | BED |
| Programming language(s) | C++ |
| Licence | Artistic License |
| Operating system(s) | Linux, Mac OS X |
Summary: A multi-purpose, ultrafast ChIP Seq peak caller
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Description
PeakRanger detects enriched regions from ChIP-seq experiments and also detect summits within these regions. The software is faster than most existing peak callers while consuming less memories.
Links
References
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