SeqSaw
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Application data |
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| Created by | Xi Wang |
|---|---|
| Biological application domain(s) | RNA-Seq, Alternative splicing |
| Principal bioinformatics method(s) | Read mapping, Sequence alignment |
| Technology | Illumina |
| Created at | Tsinghua University |
| Maintained? | Yes |
| Input format(s) | FASTA |
| Output format(s) | SAM, BED |
| Software features | Short Spliced Sequence Mapping Tool |
| Programming language(s) | C++ |
| Software libraries | SeqMap |
| Licence | GPL |
| Operating system(s) | Linux |
Summary: A package for mapping of spliced reads and unbiased detection of novel splice junctions from RNA-seq data.
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Description
A package for mapping of spliced reads and unbiased detection of novel junctions from RNA-seq data.
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References
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