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{{Bioinformatics application
|sw summary=BBMap is a fast splice-aware aligner for RNA and DNA. It is faster than almost all short-read aligners, yet retains unrivaled sensitivity and specificity, particularly for reads with many errors and indels.
|bio domain=Resequencing, Alignment, Quality Control, RNA-Seq Alignmentalignment, Alternative splicing, Whole genome resequencing, SNP discovery, Phylogenetics, Metagenomics, Read Binningbinning|bio method=Read mapping, RNA-Seq analysis, Alignment, Quality Sequence trimming, Sequence contamination filtering, |bio tech=Sanger, Illumina, 454, Ion Torrent, PacBio,
|created by=Brian Bushnell
|maintained=Yes
|language=Java 7
|licence=BSD
|os=Windows, *NIX, Mac OS X, all supporting JVM,
}}
== Description ==
