USeq

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Application data

Biological application domain(s) ChIP-seq, RNA-Seq alignment
Maintained? Yes
Programming language(s) Java
Licence BSD
Contact: useq-users@lists.sourceforge.net

Summary: Collection of software tools for for both low and high level analysis of next generation, ultra high throughput signature sequencing data from the Solexa, SOLiD, and 454 platforms. Initial emphasis: chIP-seq and RNA-Seq with FDR estimations

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Links


References

  1. . 2008. BMC Bioinformatics


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