Difference between revisions of "Tablet"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. | |sw summary=Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. | ||
| + | |bio domain=Genomics, Genotyping, Comparative Genomics | ||
|bio method=Assembly visualization, | |bio method=Assembly visualization, | ||
|bio tech=Solexa, 454 | |bio tech=Solexa, 454 | ||
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|input format=MAQ, ACE, AFG, BANK, SAM, BAM, SOAP | |input format=MAQ, ACE, AFG, BANK, SAM, BAM, SOAP | ||
|language=Java | |language=Java | ||
| + | |licence=Free (modified BSD) | ||
|os=Windows, Solaris, MacOS, Linux, | |os=Windows, Solaris, MacOS, Linux, | ||
}} | }} | ||
Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Supporting a range of input assembly formats, Tablet provides high-quality visualizations showing data in packed or stacked views, allowing instant access and navigation to any region of interest, and whole contig overviews and data summaries. Tablet is both multi-core aware and memory-efficient, allowing it to handle assemblies containing millions of reads, even on a 32-bit desktop machine. | Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Supporting a range of input assembly formats, Tablet provides high-quality visualizations showing data in packed or stacked views, allowing instant access and navigation to any region of interest, and whole contig overviews and data summaries. Tablet is both multi-core aware and memory-efficient, allowing it to handle assemblies containing millions of reads, even on a 32-bit desktop machine. | ||
Tablet is freely available for Microsoft Windows, Apple OS X, Linux and Solaris. Fully bundled installers can be downloaded from http://bioinf.scri.ac.uk/tablet in 32 and 64-bit versions. Example screenshots are available at http://bioinf.scri.ac.uk/tablet/screenshots.shtml. | Tablet is freely available for Microsoft Windows, Apple OS X, Linux and Solaris. Fully bundled installers can be downloaded from http://bioinf.scri.ac.uk/tablet in 32 and 64-bit versions. Example screenshots are available at http://bioinf.scri.ac.uk/tablet/screenshots.shtml. | ||
Revision as of 17:22, 15 December 2009
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Application data |
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| Created by | Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall D |
|---|---|
| Biological application domain(s) | Genomics, Genotyping, Comparative Genomics |
| Principal bioinformatics method(s) | Assembly visualization |
| Technology | Solexa, 454 |
| Created at | Plant Bioinformatics Group, Genetics Programme, SCRI, Dundee |
| Maintained? | Yes |
| Input format(s) | MAQ, ACE, AFG, BANK, SAM, BAM, SOAP |
| Programming language(s) | Java |
| Licence | Free (modified BSD) |
| Operating system(s) | Windows, Solaris, MacOS, Linux |
Summary: Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments.
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Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Supporting a range of input assembly formats, Tablet provides high-quality visualizations showing data in packed or stacked views, allowing instant access and navigation to any region of interest, and whole contig overviews and data summaries. Tablet is both multi-core aware and memory-efficient, allowing it to handle assemblies containing millions of reads, even on a 32-bit desktop machine. Tablet is freely available for Microsoft Windows, Apple OS X, Linux and Solaris. Fully bundled installers can be downloaded from http://bioinf.scri.ac.uk/tablet in 32 and 64-bit versions. Example screenshots are available at http://bioinf.scri.ac.uk/tablet/screenshots.shtml.
