Tablet
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Application data |
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| Created by | Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall D |
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| Biological application domain(s) | Genomics, Genotyping, Comparative genomics |
| Principal bioinformatics method(s) | Sequence assembly visualisation |
| Technology | Illumina, 454, Sanger |
| Created at | Information and Computational Sciences, The James Hutton Institute, Dundee, UK |
| Maintained? | Yes |
| Input format(s) | MAQ, ACE, AFG, SAM, BAM, SOAP, FASTQ, FASTA, GFF3, VCF, GTF |
| Output format(s) | PNG |
| Software features | Sequence assembly visualisation |
| Programming language(s) | Java |
| Interface type(s) | Desktop GUI |
| Resource type(s) | Desktop application |
| Licence | BSD |
| Operating system(s) | Windows, OS X, Linux |
Summary: Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments.
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Description
Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Supporting a range of input assembly formats, Tablet provides high-quality visualizations showing data in packed or stacked views, allowing instant access and navigation to any region of interest, and whole contig overviews and data summaries. Tablet is both multi-core aware and memory-efficient, allowing it to handle assemblies containing millions of reads, even on a 32-bit desktop machine.
Tablet is freely available for Microsoft Windows, OS X, and Linux. Fully bundled installers can be downloaded from http://ics.hutton.ac.uk/tablet in 32 and 64-bit versions. Example screenshots are available at http://ics.hutton.ac.uk/tablet/tablet-screenshots.
Links
References
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| Web Search | Wiki Sites | Scientific |
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