Difference between revisions of "USeq"
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{{Bioinformatics application | {{Bioinformatics application | ||
|sw summary=Collection of software tools for for both low and high level analysis of next generation, ultra high throughput signature sequencing data from the Solexa, SOLiD, and 454 platforms. Initial emphasis: chIP-seq and RNA-Seq with FDR estimations | |sw summary=Collection of software tools for for both low and high level analysis of next generation, ultra high throughput signature sequencing data from the Solexa, SOLiD, and 454 platforms. Initial emphasis: chIP-seq and RNA-Seq with FDR estimations | ||
| − | |bio domain=ChIP- | + | |bio domain=ChIP-seq, RNA-Seq alignment |
|maintained=Yes | |maintained=Yes | ||
|email address=useq-users@lists.sourceforge.net | |email address=useq-users@lists.sourceforge.net | ||
Latest revision as of 10:37, 11 January 2016
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Application data |
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| Biological application domain(s) | ChIP-seq, RNA-Seq alignment |
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| Maintained? | Yes |
| Programming language(s) | Java |
| Licence | BSD |
| Contact: | useq-users@lists.sourceforge.net |
Summary: Collection of software tools for for both low and high level analysis of next generation, ultra high throughput signature sequencing data from the Solexa, SOLiD, and 454 platforms. Initial emphasis: chIP-seq and RNA-Seq with FDR estimations
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