ICORN

From SEQwiki
Jump to: navigation, search

Application data

Principal bioinformatics method(s) Sequence assembly, Sequencing quality control
Created at Sanger Institute
Maintained? Maybe

Summary: Iteratively aligns deep coverage of short sequencing reads to correct errors in reference genome sequences and evaluate their accuracy.

"Error: no local variable "counter" was set." is not a number.

ICORN a.k.a. ACORN is a software to correct reference genome sequences. The main idea is to iteratively map reads and find differences in the sequence. The changes the sequence are corrected is the amount of perfect mapping reads over this region is not decreased. Results are export for Artemis or Gap4.

Links


References

  1. . 2010. Bioinformatics


To add a reference for ICORN, enter the PubMed ID in the field below and click 'Add'.

 


Search for "ICORN" in the SEQanswers forum / BioStar or:

Web Search Wiki Sites Scientific