Resequencing

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The bioinformatics applications assigned the Biological domain Resequencing ([ ]) are tabulated below.

Definition:

Synonyms:

Query returned 5 results.

	Biological domain	Bioinformatics method	Input format	Output format
BBMap	Sequence alignment Whole genome resequencing RNA-Seq alignment SNP detection Metagenomics Phylogenetics Alternative splicing Resequencing Quality control Read binning	Read mapping Sequence alignment Sequence contamination filtering Sequence trimming RNA-Seq analysis	FASTA FASTQ SAM Scarf Paired FASTA+QUAL Interleaved Gzip	FASTA FASTQ SAM FASTA+QUAL Gzip
BigBWA	Whole genome resequencing Genomics Exome capture Sequencing Resequencing Exome and whole genome variant detection Exome analysis Exome	Read mapping Sequence alignment Mapping	FASTA FASTQ BAM	SAM/BAM
Geoseq	Resequencing	Read mapping
Mlgt	Exome capture Genotyping Resequencing	Sequence error correction Sequence contamination filtering Sequence analysis Read alignment DNA barcoding	FASTA	PDF Tab-delimited file RData
Optimus Primer	Resequencing	PCR primer design