Population genetics

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The bioinformatics applications assigned the Biological domain Population genetics ([ ]) are tabulated below.

Definition:

Synonyms:

Query returned 10 results.

	Biological domain	Bioinformatics method	Input format	Output format
Biopython	Sequence analysis Phylogenetics Population genetics Protein structure analysis	Sequence parsing	FASTA FASTQ GenBank ACE Nexus SFF PHD AB1 QUAL Blast output Phylip Clustalw EMBL Newick PIR	FASTA FASTQ GenBank Nexus SFF QUAL Phylip Clustalw EMBL Newick
BioSmalltalk	Sequence analysis Phylogenetics Population genetics Protein structure analysis	Sequence parsing	FASTA GenBank Nexus Blast output Phylip Clustalw EMBL	FASTA GenBank Nexus Phylip Clustalw EMBL
CatchAll	Metagenomics Population genetics
Geneious	Sequence assembly (de novo assembly) Genomics RNA-Seq Metagenomics Epigenomics Structural variation Sequence analysis Phylogenetics Population genetics	Sequence assembly Read mapping Sequence alignment Visualisation Annotation Sequence assembly validation Genome visualisation Variant calling DNA barcoding Sequence motif discovery	FASTA FASTQ SAM ELAND GenBank CSFASTA CSQUAL
Gowinda	Genomics Sequencing Population genetics Population Genomics	Ontology comparison Functional enrichment Genome-wide association study	VCF Pileup GTF
PiCall	Indel detection Population genetics
PoPoolation	Population genetics
PoPoolation2	Genomics Population genetics
ProbHD	SNP detection Population genetics
Syapse	Genomics Transcriptomics DNA methylation ChIP-seq SNP detection Indel detection RNA-Seq Metagenomics DNA transcription Epigenomics Structural variation Population genetics Comparative genomics DNA-Seq Regulatory genomics	Visualisation Sequence analysis Differential expression analysis Ontology comparison Exome analysis Variant classification	VCF