Browse data: Bioinformatics application

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Maybe (25) · No (5) · Yes (154)

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454 (46) · ABI SOLiD (24) · Affymetrix (1) · All (1) · Any (18) · Any sequencing platform (1) · Complete Genomics (1) · Helicos (3) · Illumina (92) · Illumina HiSeq (10) · Illumina HiSeq/NextSeq/MiSeq/Solexa (1) · Illumina Solexa (8) · Ion Torrent (14) · Ion proton (2) · NGS (1) · PacBio (5) · Pyrosequencing (QIAGEN) (1) · SOLiD (2) · Sanger (22) · all (1)

; Ab-initio gene prediction Adapter removal Analysis Annotation Assembly Base-calling Biological interpretation Bisulfite mapping Classification Clustering Comparative genomics Conversion Correlation DNA barcoding Data retrieval Differential expression analysis Enrichment Expectation Maximisation File reformatting Filtering Format conversion Formatting Functional enrichment Gene expression analysis Gene expression profiling Genetic variation analysis Genome-wide association study Genome indexing (Burrows-Wheeler) Genome visualisation Genomic region matching Genotyping Gibbs sampling Graph reduction Hadoop Heat map generation Integrated solution K-mer counting Laboratory information management Learning algorithm Local sequence alignment Localised reassembly Mapping Methylation analysis Methylation calling MicroRNA detection Modelling and simulation Mutation detection Nucleic acid sequence feature detection Ontology comparison Pathway or network analysis Peak calling Peptide mass fingerprint Phase pattern prediction Plotting and rendering Quality control RNA-Seq analysis Read alignment Read depth analysis Read mapping Read pre-processing Repeat sequence organisation analysis SNP annotation SNP calling Scaffolding Sequence alignment Sequence alignment analysis Sequence alignment comparison Sequence alignment visualisation Sequence analysis Sequence annotation Sequence assembly Sequence assembly (de-novo assembly) Sequence assembly validation Sequence assembly visualisation Sequence clustering Sequence contamination filtering Sequence error correction Sequence motif comparison Sequence motif discovery Sequence motif recognition Sequence parsing Sequence trimming Sequencing quality control Signal Split-read mapping Standardisation and normalisation Statistical calculation Transcriptome assembly Variant calling Variant prioritisation Viewer Visualisation Whole genome breakend assembly Workflows

; Alternative splicing Cancer biology ChIP-on-chip ChIP-seq Comparative genomics Copy number estimation DNA DNA-Seq DNA methylation DNA transcription Data handling De-novo assembly Epigenetics Epigenomics Exome Exome analysis Exome and whole genome variant detection Exome capture Functional genomics Gene expression analysis Gene regulation Gene structure Genetic variation Genetic variation analysis Genomic assembly Genomics Genotyping High-throughput sequencing Immunoprecipitation experiment Indel detection Laboratory information management Mapping MeDIP-Seq Metabolic reconstruction Metagenomics Methyl-Seq Microbial Surveillance Next Generation Sequencing Pathway or network analysis Personalised medicine Phylogenetics Population Genomics Population genetics Protein structure analysis Public health and epidemiology Quality control RNA RNA-Seq RNA-Seq alignment RNA-Seq quantification Regulatory RNA Regulatory genomics Resequencing SNP SNP detection Sequence alignment Sequence analysis Sequence annotation Sequence assembly Sequence assembly (de-novo assembly) Sequence assembly (de novo assembly) Sequence functional annotation Sequence motifs Sequencing Small RNA-Seq Small RNA Sequencing Statistical calculation Storage Structural variation Transcription factors and regulatory sites Transcriptomics Viral genomics Whole genome resequencing Workflows